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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs4034961 chr5:151678086 T/A FILIP1L chr3:99548985-99833357:- -0.22 -6.27 7.92E-10 Box Plot
THCA rs4034962 chr5:151678152 A/G FILIP1L chr3:99548985-99833357:- -0.22 -6.27 7.92E-10 Box Plot
THCA rs4034965 chr5:151679992 G/A FILIP1L chr3:99548985-99833357:- -0.22 -6.12 1.99E-9 Box Plot
THCA rs4035344 chr6:151784077 A/G NEK5 chr13:52607747-52703214:- 0.59 6.96 1.14E-11 Box Plot
THCA rs4041727 chr15:31050610 G/T CHRNA7 chr15:32215641-32465219:+ 0.31 6.99 9.11E-12 Box Plot
THCA rs4041909 chr15:31030067 T/C CHRNA7 chr15:32215641-32465219:+ 0.32 7.42 5.48E-13 Box Plot
THCA rs4042922 chr10:51819298 A/C FAM21B chr10:47894023-47949412:+ -0.45 -7.22 2.03E-12 Box Plot
THCA rs4042924 chr10:51819996 C/G FAM21B chr10:47894023-47949412:+ 0.61 7.95 1.36E-14 Box Plot
THCA rs4042941 chr10:51809600 T/C FAM21B chr10:47894023-47949412:+ 0.49 7.88 2.17E-14 Box Plot
THCA rs4044687 chr5:176596941 CAT/C LOC388955 chr2:63849182-63850159:- -0.93 -24.52 1.42E-86 Box Plot
THCA rs40543 chr7:89070582 A/G RAB40B chr17:80612849-80656604:- -0.35 -5.93 5.96E-9 Box Plot
THCA rs4054360 chr17:15621553 C/T ZNF286B chr17:18561742-18585575:- 0.7 13.25 2.47E-34 Box Plot
THCA rs4058176 chr1:121188905 C/T NBPF14 chr1:148003642-148025863:- 0.43 10.36 7.92E-23 Box Plot
THCA rs4065349 chr2:132236646 T/C TUBA3E chr2:130949316-130956034:- 0.53 6.19 1.33E-9 Box Plot
THCA rs406751 chr16:16361275 G/A NOMO2 chr16:18511182-18573533:- -0.49 -7.3 1.23E-12 Box Plot